Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs112080769 chr16:71816369 A/AATT 0.000184 108 16.17 11.1 0 KM Plot
LAML rs11210748 chr1:43360120 C/T 0.00018 110 16.3 11.13 1.02 KM Plot
LAML rs11223631 chr11:133810195 G/A 1.83E-9 110 13.1 17.82 0.52 KM Plot
LAML rs11223639 chr11:133819442 A/G 5.8E-5 111 13.1 23.37 1.03 KM Plot
LAML rs11229549 chr11:58395914 T/C 1.98E-5 110 20.27 11.13 4.58 KM Plot
LAML rs112316871 chr13:100088157 CT/C 5.58E-5 111 17.23 10.67 1.02 KM Plot
LAML rs112349545 chr1:43337978 T/C 0.000166 110 15.73 10.67 1.02 KM Plot
LAML rs112396958 chr6:134284610 T/C 0.000172 109 16.17 10.13 1 KM Plot
LAML rs11253451 chr10:852885 C/T 2.75E-6 109 16.3 16.17 7.13 KM Plot
LAML rs11253504 chr10:956046 A/G 4.43E-5 110 15.23 14.63 5.1 KM Plot
LAML rs11253518 chr10:971600 A/C 6.36E-5 111 15.23 16.17 5.1 KM Plot
LAML rs112588913 chr13:21844277 C/T 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs112694468 chr20:48619336 C/T 0.000148 111 12.65 22.28 0 KM Plot
LAML rs112740904 chr13:114631075 T/G 5.45E-7 110 12.65 19.82 0.5 KM Plot
LAML rs112751657 chr6:127630589 TAAAGAA/T 1.86E-5 111 0.98 16.27 15.17 KM Plot